Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 AC087289.5-201ENST00000586076 3175 ntBASIC17.26■□□□□ 0.35
HIST1H1DP16402 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 KRT16P2-201ENST00000414673 1423 ntBASIC17.25■□□□□ 0.35
HIST1H1DP16402 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 AP001330.3-201ENST00000520123 633 ntBASIC17.25■□□□□ 0.35
HIST1H1DP16402 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1DP16402 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIST1H1DP16402 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 AC116562.4-201ENST00000641316 2276 ntBASIC17.24■□□□□ 0.35
HIST1H1DP16402 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 TPRG1LP1-201ENST00000598702 760 ntBASIC17.24■□□□□ 0.35
HIST1H1DP16402 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST1H1DP16402 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1DP16402 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.24■□□□□ 0.35
HIST1H1DP16402 AC125437.2-201ENST00000625180 2167 ntBASIC17.23■□□□□ 0.35
HIST1H1DP16402 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 KRT87P-202ENST00000534226 1464 ntBASIC17.23■□□□□ 0.35
HIST1H1DP16402 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1DP16402 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HIST1H1DP16402 AC116050.2-201ENST00000612102 1779 ntBASIC17.23■□□□□ 0.35
HIST1H1DP16402 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1DP16402 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1DP16402 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIST1H1DP16402 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.22■□□□□ 0.35
HIST1H1DP16402 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms