Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.2■□□□□ 0.98
H2AFXP16104 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.2■□□□□ 0.98
H2AFXP16104 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
H2AFXP16104 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
H2AFXP16104 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 PCDHB18P-201ENST00000524813 2368 ntBASIC21.19■□□□□ 0.98
H2AFXP16104 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
H2AFXP16104 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.19■□□□□ 0.98
H2AFXP16104 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.19■□□□□ 0.98
H2AFXP16104 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2AFXP16104 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.18■□□□□ 0.98
H2AFXP16104 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.18■□□□□ 0.98
H2AFXP16104 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.18■□□□□ 0.98
H2AFXP16104 LINC01465-201ENST00000408887 1940 ntBASIC21.18■□□□□ 0.98
H2AFXP16104 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 OR2I1P-207ENST00000453522 948 ntBASIC21.18■□□□□ 0.98
H2AFXP16104 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
H2AFXP16104 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
H2AFXP16104 AL032819.2-201ENST00000624543 2162 ntBASIC21.18■□□□□ 0.98
H2AFXP16104 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
H2AFXP16104 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2AFXP16104 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.18■□□□□ 0.98
H2AFXP16104 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.18■□□□□ 0.98
H2AFXP16104 CROCCP3-202ENST00000420820 1947 ntBASIC21.17■□□□□ 0.98
H2AFXP16104 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
H2AFXP16104 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.17■□□□□ 0.98
H2AFXP16104 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.17■□□□□ 0.98
H2AFXP16104 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 AC074183.2-201ENST00000623112 922 ntBASIC21.17■□□□□ 0.98
H2AFXP16104 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
H2AFXP16104 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
H2AFXP16104 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H2AFXP16104 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.17■□□□□ 0.98
H2AFXP16104 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 AP000997.3-201ENST00000623333 2250 ntBASIC21.16■□□□□ 0.98
H2AFXP16104 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
H2AFXP16104 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
H2AFXP16104 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
H2AFXP16104 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.16■□□□□ 0.98
H2AFXP16104 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.16■□□□□ 0.98
H2AFXP16104 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.16■□□□□ 0.98
H2AFXP16104 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H2AFXP16104 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
H2AFXP16104 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.16■□□□□ 0.98
H2AFXP16104 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.15■□□□□ 0.98
H2AFXP16104 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.15■□□□□ 0.98
H2AFXP16104 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
H2AFXP16104 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
H2AFXP16104 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.15■□□□□ 0.98
H2AFXP16104 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H2AFXP16104 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms