Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 UNC93B2-201ENST00000285383 730 ntBASIC20.79■□□□□ 0.92
SRFP11831 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.79■□□□□ 0.92
SRFP11831 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.79■□□□□ 0.92
SRFP11831 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.79■□□□□ 0.92
SRFP11831 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.79■□□□□ 0.92
SRFP11831 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.79■□□□□ 0.92
SRFP11831 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.79■□□□□ 0.92
SRFP11831 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SRFP11831 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRFP11831 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.78■□□□□ 0.92
SRFP11831 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.78■□□□□ 0.92
SRFP11831 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SRFP11831 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.78■□□□□ 0.92
SRFP11831 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
SRFP11831 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.78■□□□□ 0.92
SRFP11831 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.78■□□□□ 0.92
SRFP11831 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRFP11831 AC079598.2-202ENST00000546624 1451 ntBASIC20.77■□□□□ 0.92
SRFP11831 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFP11831 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFP11831 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRFP11831 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRFP11831 AC113347.1-201ENST00000413321 391 ntBASIC20.77■□□□□ 0.92
SRFP11831 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.77■□□□□ 0.92
SRFP11831 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.77■□□□□ 0.92
SRFP11831 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.77■□□□□ 0.92
SRFP11831 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRFP11831 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.77■□□□□ 0.91
SRFP11831 KRT8P9-201ENST00000558927 1449 ntBASIC20.77■□□□□ 0.91
SRFP11831 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SRFP11831 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SRFP11831 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SRFP11831 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.76■□□□□ 0.91
SRFP11831 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.76■□□□□ 0.91
SRFP11831 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.76■□□□□ 0.91
SRFP11831 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 AC023632.3-201ENST00000521633 145 ntBASIC20.76■□□□□ 0.91
SRFP11831 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.76■□□□□ 0.91
SRFP11831 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.76■□□□□ 0.91
SRFP11831 AL031963.3-201ENST00000606441 850 ntBASIC20.76■□□□□ 0.91
SRFP11831 AP000525.1-201ENST00000608286 694 ntBASIC20.76■□□□□ 0.91
SRFP11831 REXO1L10P-201ENST00000615707 1290 ntBASIC20.76■□□□□ 0.91
SRFP11831 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRFP11831 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.76■□□□□ 0.91
SRFP11831 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.76■□□□□ 0.91
SRFP11831 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRFP11831 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRFP11831 LINC01568-207ENST00000641790 1380 ntBASIC20.75■□□□□ 0.91
SRFP11831 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.75■□□□□ 0.91
SRFP11831 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRFP11831 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.75■□□□□ 0.91
SRFP11831 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRFP11831 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.75■□□□□ 0.91
SRFP11831 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRFP11831 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.75■□□□□ 0.91
SRFP11831 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.75■□□□□ 0.91
SRFP11831 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.75■□□□□ 0.91
SRFP11831 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.75■□□□□ 0.91
SRFP11831 AC004264.1-201ENST00000608354 794 ntBASIC20.75■□□□□ 0.91
SRFP11831 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRFP11831 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SRFP11831 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
SRFP11831 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.74■□□□□ 0.91
SRFP11831 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFP11831 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRFP11831 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.74■□□□□ 0.91
SRFP11831 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFP11831 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFP11831 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SRFP11831 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
SRFP11831 MIR1238-201ENST00000408483 83 ntBASIC20.74■□□□□ 0.91
SRFP11831 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.74■□□□□ 0.91
SRFP11831 AP002982.1-201ENST00000492365 877 ntBASIC20.74■□□□□ 0.91
SRFP11831 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.74■□□□□ 0.91
SRFP11831 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SRFP11831 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFP11831 AL121906.2-201ENST00000621597 723 ntBASIC20.74■□□□□ 0.91
SRFP11831 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms