Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.38■■□□□ 1.01
RARAP10276 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RARAP10276 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.37■■□□□ 1.01
RARAP10276 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RARAP10276 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.37■■□□□ 1.01
RARAP10276 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RARAP10276 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RARAP10276 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.36■■□□□ 1.01
RARAP10276 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RARAP10276 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.36■■□□□ 1.01
RARAP10276 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RARAP10276 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.36■■□□□ 1.01
RARAP10276 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RARAP10276 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.36■■□□□ 1.01
RARAP10276 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.36■■□□□ 1.01
RARAP10276 AC137761.2-201ENST00000561729 223 ntBASIC21.36■■□□□ 1.01
RARAP10276 AC145350.3-201ENST00000569033 163 ntBASIC21.36■■□□□ 1.01
RARAP10276 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RARAP10276 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RARAP10276 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RARAP10276 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
RARAP10276 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RARAP10276 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.36■■□□□ 1.01
RARAP10276 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RARAP10276 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RARAP10276 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RARAP10276 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.35■■□□□ 1.01
RARAP10276 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.35■■□□□ 1.01
RARAP10276 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.35■■□□□ 1.01
RARAP10276 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RARAP10276 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RARAP10276 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.35■■□□□ 1.01
RARAP10276 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.35■■□□□ 1.01
RARAP10276 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RARAP10276 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.35■■□□□ 1.01
RARAP10276 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RARAP10276 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RARAP10276 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RARAP10276 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.34■■□□□ 1.01
RARAP10276 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RARAP10276 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 TERF1P5-201ENST00000477545 1207 ntBASIC21.34■■□□□ 1.01
RARAP10276 AL162430.1-201ENST00000480705 870 ntBASIC21.34■■□□□ 1.01
RARAP10276 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RARAP10276 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 AC010536.3-201ENST00000620306 533 ntBASIC21.34■■□□□ 1.01
RARAP10276 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.34■■□□□ 1.01
RARAP10276 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RARAP10276 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RARAP10276 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RARAP10276 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.33■■□□□ 1.01
RARAP10276 AC007322.3-201ENST00000426526 701 ntBASIC21.33■■□□□ 1.01
RARAP10276 KRT18P11-201ENST00000435214 1283 ntBASIC21.33■■□□□ 1.01
RARAP10276 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RARAP10276 MIR5787-201ENST00000611784 55 ntBASIC21.33■■□□□ 1.01
RARAP10276 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.33■■□□□ 1.01
RARAP10276 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms