Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 SLD5YDR489W 885 nt0.94□□□□□ -2.26
RPL40AP0CH08 VAB2YEL005C 849 nt0.94□□□□□ -2.26
RPL40AP0CH08 ARG3YJL088W 1017 nt0.94□□□□□ -2.26
RPL40AP0CH08 CCE1YKL011C 1062 nt0.94□□□□□ -2.26
RPL40AP0CH08 NOP15YNL110C 663 nt0.94□□□□□ -2.26
RPL40AP0CH08 CIN2YPL241C 807 nt0.94□□□□□ -2.26
RPL40AP0CH08 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
RPL40AP0CH08 YSW1YBR148W 1830 nt0.94□□□□□ -2.26
RPL40AP0CH08 ADR1YDR216W 3972 nt0.93□□□□□ -2.26
RPL40AP0CH08 ATP16YDL004W 483 nt0.93□□□□□ -2.26
RPL40AP0CH08 YHR214W-AYHR214W-A 486 nt0.93□□□□□ -2.26
RPL40AP0CH08 APL1YJR005W 2103 nt0.93□□□□□ -2.26
RPL40AP0CH08 YAR068WYAR068W 486 nt0.93□□□□□ -2.26
RPL40AP0CH08 MLH3YPL164C 2148 nt0.93□□□□□ -2.26
RPL40AP0CH08 AME1YBR211C 975 nt0.93□□□□□ -2.26
RPL40AP0CH08 GIC2YDR309C 1152 nt0.92□□□□□ -2.26
RPL40AP0CH08 RPN9YDR427W 1182 nt0.92□□□□□ -2.26
RPL40AP0CH08 MAM1YER106W 909 nt0.92□□□□□ -2.26
RPL40AP0CH08 GOS1YHL031C 672 nt0.92□□□□□ -2.26
RPL40AP0CH08 YLR307C-AYLR307C-A 264 nt0.92□□□□□ -2.26
RPL40AP0CH08 MSS11YMR164C 2277 nt0.92□□□□□ -2.26
RPL40AP0CH08 HMI1YOL095C 2121 nt0.92□□□□□ -2.26
RPL40AP0CH08 MNL2YLR057W 2550 nt0.92□□□□□ -2.26
RPL40AP0CH08 YNL034WYNL034W 1839 nt0.92□□□□□ -2.26
RPL40AP0CH08 ASM4YDL088C 1587 nt0.91□□□□□ -2.26
RPL40AP0CH08 YDR286CYDR286C 345 nt0.91□□□□□ -2.26
RPL40AP0CH08 SDL1YIL167W 633 nt0.91□□□□□ -2.26
RPL40AP0CH08 FCF2YLR051C 654 nt0.91□□□□□ -2.26
RPL40AP0CH08 RPS10BYMR230W 318 nt0.91□□□□□ -2.26
RPL40AP0CH08 PEX27YOR193W 1131 nt0.91□□□□□ -2.26
RPL40AP0CH08 NCL1YBL024W 2055 nt0.91□□□□□ -2.26
RPL40AP0CH08 ECM25YJL201W 1800 nt0.9□□□□□ -2.27
RPL40AP0CH08 PPN1YDR452W 2025 nt0.9□□□□□ -2.27
RPL40AP0CH08 MDS3YGL197W 4464 nt0.9□□□□□ -2.27
RPL40AP0CH08 YCR024C-BYCR024C-B 267 nt0.9□□□□□ -2.27
RPL40AP0CH08 NSE4YDL105W 1209 nt0.9□□□□□ -2.27
RPL40AP0CH08 YDR042CYDR042C 603 nt0.9□□□□□ -2.27
RPL40AP0CH08 YGL258W-AYGL258W-A 234 nt0.9□□□□□ -2.27
RPL40AP0CH08 SVP26YHR181W 687 nt0.9□□□□□ -2.27
RPL40AP0CH08 VPS25YJR102C 609 nt0.9□□□□□ -2.27
RPL40AP0CH08 NEJ1YLR265C 1029 nt0.9□□□□□ -2.27
RPL40AP0CH08 ATX1YNL259C 222 nt0.9□□□□□ -2.27
RPL40AP0CH08 MGE1YOR232W 687 nt0.9□□□□□ -2.27
RPL40AP0CH08 TBS1YBR150C 3285 nt0.9□□□□□ -2.27
RPL40AP0CH08 YJR029WYJR029W 5268 nt0.9□□□□□ -2.27
RPL40AP0CH08 YPR137C-BYPR137C-B 5268 nt0.9□□□□□ -2.27
RPL40AP0CH08 HIR3YJR140C 4947 nt0.9□□□□□ -2.27
RPL40AP0CH08 BFA1YJR053W 1725 nt0.89□□□□□ -2.27
RPL40AP0CH08 PRP39YML046W 1890 nt0.89□□□□□ -2.27
RPL40AP0CH08 YDL025W-AYDL025W-A 105 nt0.89□□□□□ -2.27
RPL40AP0CH08 NOP10YHR072W-A 177 nt0.89□□□□□ -2.27
RPL40AP0CH08 GPN3YLR243W 819 nt0.89□□□□□ -2.27
RPL40AP0CH08 SPC24YMR117C 642 nt0.89□□□□□ -2.27
RPL40AP0CH08 CYB5YNL111C 363 nt0.89□□□□□ -2.27
RPL40AP0CH08 IZH4YOL101C 939 nt0.89□□□□□ -2.27
RPL40AP0CH08 RPN8YOR261C 1017 nt0.89□□□□□ -2.27
RPL40AP0CH08 YDR199WYDR199W 366 nt0.88□□□□□ -2.27
RPL40AP0CH08 RAM2YKL019W 951 nt0.88□□□□□ -2.27
RPL40AP0CH08 SEC3YER008C 4011 nt0.87□□□□□ -2.27
RPL40AP0CH08 BI3Q0115 1554 nt0.87□□□□□ -2.27
RPL40AP0CH08 NST1YNL091W 3723 nt0.87□□□□□ -2.27
RPL40AP0CH08 SLK19YOR195W 2466 nt0.87□□□□□ -2.27
RPL40AP0CH08 NUP157YER105C 4176 nt0.87□□□□□ -2.27
RPL40AP0CH08 RRT15YLR162W-A 189 nt0.87□□□□□ -2.27
RPL40AP0CH08 YNL171CYNL171C 369 nt0.87□□□□□ -2.27
RPL40AP0CH08 NSL1YPL233W 651 nt0.87□□□□□ -2.27
RPL40AP0CH08 BEM2YER155C 6504 nt0.86□□□□□ -2.27
RPL40AP0CH08 NCA2YPR155C 1851 nt0.86□□□□□ -2.27
RPL40AP0CH08 EST2YLR318W 2655 nt0.86□□□□□ -2.27
RPL40AP0CH08 YHL048C-AYHL048C-A 135 nt0.86□□□□□ -2.27
RPL40AP0CH08 CIC1YHR052W 1131 nt0.86□□□□□ -2.27
RPL40AP0CH08 YJR071WYJR071W 369 nt0.86□□□□□ -2.27
RPL40AP0CH08 TAP42YMR028W 1101 nt0.86□□□□□ -2.27
RPL40AP0CH08 YOR394C-AYOR394C-A 168 nt0.86□□□□□ -2.27
RPL40AP0CH08 RAD50YNL250W 3939 nt0.86□□□□□ -2.27
RPL40AP0CH08 PAN2YGL094C 3348 nt0.86□□□□□ -2.27
RPL40AP0CH08 THO2YNL139C 4794 nt0.85□□□□□ -2.27
RPL40AP0CH08 YCR102W-AYCR102W-A 198 nt0.85□□□□□ -2.27
RPL40AP0CH08 FAR7YFR008W 666 nt0.85□□□□□ -2.27
RPL40AP0CH08 CTK3YML112W 891 nt0.85□□□□□ -2.27
RPL40AP0CH08 YBR062CYBR062C 543 nt0.85□□□□□ -2.27
RPL40AP0CH08 ZRG8YER033C 3231 nt0.85□□□□□ -2.27
RPL40AP0CH08 GIC1YHR061C 945 nt0.84□□□□□ -2.27
RPL40AP0CH08 IMP3YHR148W 552 nt0.84□□□□□ -2.27
RPL40AP0CH08 YOL085W-AYOL085W-A 213 nt0.84□□□□□ -2.27
RPL40AP0CH08 VID24YBR105C 1089 nt0.84□□□□□ -2.27
RPL40AP0CH08 PEX34YCL056C 435 nt0.84□□□□□ -2.27
RPL40AP0CH08 AI1Q0050 2505 nt0.83□□□□□ -2.28
RPL40AP0CH08 SCC2YDR180W 4482 nt0.83□□□□□ -2.28
RPL40AP0CH08 UBC9YDL064W 474 nt0.83□□□□□ -2.28
RPL40AP0CH08 URM1YIL008W 300 nt0.83□□□□□ -2.28
RPL40AP0CH08 YJL026C-AYJL026C-A 222 nt0.83□□□□□ -2.28
RPL40AP0CH08 YNL114CYNL114C 372 nt0.83□□□□□ -2.28
RPL40AP0CH08 LSM7YNL147W 348 nt0.83□□□□□ -2.28
RPL40AP0CH08 YOR152CYOR152C 771 nt0.83□□□□□ -2.28
RPL40AP0CH08 ICS2YBR157C 768 nt0.83□□□□□ -2.28
RPL40AP0CH08 SMC1YFL008W 3678 nt0.83□□□□□ -2.28
RPL40AP0CH08 SET3YKR029C 2256 nt0.82□□□□□ -2.28
RPL40AP0CH08 YLR149CYLR149C 2193 nt0.82□□□□□ -2.28
RPL40AP0CH08 YDR262WYDR262W 819 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 53.8 ms