Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H2ABP04908 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
HIST1H2ABP04908 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H2ABP04908 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.52■□□□□ 0.55
HIST1H2ABP04908 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 AC027702.1-201ENST00000563810 1770 ntBASIC18.51■□□□□ 0.55
HIST1H2ABP04908 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 AC243732.1-201ENST00000612648 864 ntBASIC18.51■□□□□ 0.55
HIST1H2ABP04908 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H2ABP04908 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 AC020907.5-201ENST00000624372 1936 ntBASIC18.5■□□□□ 0.55
HIST1H2ABP04908 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H2ABP04908 RBM17P2-201ENST00000616397 1405 ntBASIC18.49■□□□□ 0.55
HIST1H2ABP04908 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 AC097381.1-201ENST00000429019 1296 ntBASIC18.49■□□□□ 0.55
HIST1H2ABP04908 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2ABP04908 AC019069.1-201ENST00000610008 1333 ntBASIC18.49■□□□□ 0.55
HIST1H2ABP04908 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 AC007322.3-201ENST00000426526 701 ntBASIC18.48■□□□□ 0.55
HIST1H2ABP04908 CDV3P1-201ENST00000471403 739 ntBASIC18.48■□□□□ 0.55
HIST1H2ABP04908 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H2ABP04908 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms