Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRUB2O95900 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.37■■□□□ 1.01
TRUB2O95900 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.37■■□□□ 1.01
TRUB2O95900 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.37■■□□□ 1.01
TRUB2O95900 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.37■■□□□ 1.01
TRUB2O95900 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.37■■□□□ 1.01
TRUB2O95900 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
TRUB2O95900 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.37■■□□□ 1.01
TRUB2O95900 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRUB2O95900 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRUB2O95900 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRUB2O95900 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.36■■□□□ 1.01
TRUB2O95900 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TRUB2O95900 AC020907.5-201ENST00000624372 1936 ntBASIC21.36■■□□□ 1.01
TRUB2O95900 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 MCRIP2P1-201ENST00000394346 511 ntBASIC21.36■■□□□ 1.01
TRUB2O95900 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.36■■□□□ 1.01
TRUB2O95900 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRUB2O95900 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.36■■□□□ 1.01
TRUB2O95900 MIR2861-201ENST00000636310 90 ntBASIC21.36■■□□□ 1.01
TRUB2O95900 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TRUB2O95900 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRUB2O95900 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.36■■□□□ 1.01
TRUB2O95900 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRUB2O95900 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRUB2O95900 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
TRUB2O95900 SLC29A4P1-201ENST00000398760 971 ntBASIC21.35■■□□□ 1.01
TRUB2O95900 AL355472.2-201ENST00000422958 438 ntBASIC21.35■■□□□ 1.01
TRUB2O95900 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.35■■□□□ 1.01
TRUB2O95900 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRUB2O95900 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.35■■□□□ 1.01
TRUB2O95900 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRUB2O95900 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRUB2O95900 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRUB2O95900 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
TRUB2O95900 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
TRUB2O95900 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB2O95900 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB2O95900 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.34■■□□□ 1.01
TRUB2O95900 AC073130.3-201ENST00000624389 2278 ntBASIC21.34■■□□□ 1.01
TRUB2O95900 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRUB2O95900 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.34■■□□□ 1.01
TRUB2O95900 CYP2T3P-201ENST00000601990 817 ntBASIC21.34■■□□□ 1.01
TRUB2O95900 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.34■■□□□ 1.01
TRUB2O95900 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB2O95900 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.34■■□□□ 1.01
TRUB2O95900 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TRUB2O95900 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB2O95900 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.34■■□□□ 1.01
TRUB2O95900 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.34■■□□□ 1.01
TRUB2O95900 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRUB2O95900 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.33■■□□□ 1.01
TRUB2O95900 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.33■■□□□ 1.01
TRUB2O95900 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.33■■□□□ 1.01
TRUB2O95900 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRUB2O95900 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.33■■□□□ 1.01
TRUB2O95900 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TRUB2O95900 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRUB2O95900 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.33■■□□□ 1.01
TRUB2O95900 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.33■■□□□ 1.01
TRUB2O95900 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.33■■□□□ 1.01
TRUB2O95900 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.33■■□□□ 1.01
TRUB2O95900 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.33■■□□□ 1.01
TRUB2O95900 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
TRUB2O95900 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.33■■□□□ 1.01
TRUB2O95900 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.33■■□□□ 1.01
TRUB2O95900 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRUB2O95900 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
TRUB2O95900 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRUB2O95900 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRUB2O95900 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRUB2O95900 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms