Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CBX6O95503 AC133637.1-201ENST00000624115 1537 ntBASIC20.22■□□□□ 0.83
CBX6O95503 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CBX6O95503 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CBX6O95503 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CBX6O95503 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.22■□□□□ 0.83
CBX6O95503 TERF1P2-201ENST00000583350 1212 ntBASIC20.22■□□□□ 0.83
CBX6O95503 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.22■□□□□ 0.83
CBX6O95503 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX6O95503 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CBX6O95503 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX6O95503 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.22■□□□□ 0.83
CBX6O95503 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.22■□□□□ 0.83
CBX6O95503 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX6O95503 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX6O95503 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CBX6O95503 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 LINC02228-203ENST00000641970 1355 ntBASIC20.21■□□□□ 0.83
CBX6O95503 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
CBX6O95503 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CBX6O95503 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 FP700111.2-201ENST00000619190 1892 ntBASIC20.21■□□□□ 0.83
CBX6O95503 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX6O95503 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.21■□□□□ 0.83
CBX6O95503 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CBX6O95503 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 HLA-L-209ENST00000420110 1011 ntBASIC20.2■□□□□ 0.82
CBX6O95503 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.2■□□□□ 0.82
CBX6O95503 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CBX6O95503 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.2■□□□□ 0.82
CBX6O95503 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CBX6O95503 AP000974.1-201ENST00000623909 2387 ntBASIC20.2■□□□□ 0.82
CBX6O95503 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.19■□□□□ 0.82
CBX6O95503 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CBX6O95503 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.19■□□□□ 0.82
CBX6O95503 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
CBX6O95503 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.19■□□□□ 0.82
CBX6O95503 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 AL034346.1-201ENST00000568244 1277 ntBASIC20.19■□□□□ 0.82
CBX6O95503 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.19■□□□□ 0.82
CBX6O95503 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.19■□□□□ 0.82
CBX6O95503 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CBX6O95503 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CBX6O95503 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CBX6O95503 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
CBX6O95503 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CBX6O95503 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CBX6O95503 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CBX6O95503 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms