Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CSPG5O95196 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.1
CSPG5O95196 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CSPG5O95196 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.89■■□□□ 1.1
CSPG5O95196 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CSPG5O95196 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSPG5O95196 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.89■■□□□ 1.09
CSPG5O95196 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.89■■□□□ 1.09
CSPG5O95196 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSPG5O95196 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSPG5O95196 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.89■■□□□ 1.09
CSPG5O95196 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.89■■□□□ 1.09
CSPG5O95196 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSPG5O95196 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CSPG5O95196 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CSPG5O95196 AC233723.2-201ENST00000623798 2106 ntBASIC21.89■■□□□ 1.09
CSPG5O95196 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CSPG5O95196 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.88■■□□□ 1.09
CSPG5O95196 KRT17P2-201ENST00000300992 1314 ntBASIC21.88■■□□□ 1.09
CSPG5O95196 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CSPG5O95196 AC087499.1-201ENST00000418141 1075 ntBASIC21.88■■□□□ 1.09
CSPG5O95196 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CSPG5O95196 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.88■■□□□ 1.09
CSPG5O95196 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSPG5O95196 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.88■■□□□ 1.09
CSPG5O95196 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.88■■□□□ 1.09
CSPG5O95196 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.88■■□□□ 1.09
CSPG5O95196 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.88■■□□□ 1.09
CSPG5O95196 AC116050.2-201ENST00000612102 1779 ntBASIC21.88■■□□□ 1.09
CSPG5O95196 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CSPG5O95196 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CSPG5O95196 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
CSPG5O95196 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.87■■□□□ 1.09
CSPG5O95196 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.87■■□□□ 1.09
CSPG5O95196 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.87■■□□□ 1.09
CSPG5O95196 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.87■■□□□ 1.09
CSPG5O95196 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.87■■□□□ 1.09
CSPG5O95196 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CSPG5O95196 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CSPG5O95196 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.86■■□□□ 1.09
CSPG5O95196 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.86■■□□□ 1.09
CSPG5O95196 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 AC113410.3-201ENST00000623366 203 ntBASIC21.86■■□□□ 1.09
CSPG5O95196 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.86■■□□□ 1.09
CSPG5O95196 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSPG5O95196 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.86■■□□□ 1.09
CSPG5O95196 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CSPG5O95196 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.85■■□□□ 1.09
CSPG5O95196 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CSPG5O95196 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.85■■□□□ 1.09
CSPG5O95196 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.85■■□□□ 1.09
CSPG5O95196 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.85■■□□□ 1.09
CSPG5O95196 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.85■■□□□ 1.09
CSPG5O95196 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.85■■□□□ 1.09
CSPG5O95196 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
CSPG5O95196 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSPG5O95196 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CSPG5O95196 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CSPG5O95196 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSPG5O95196 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CSPG5O95196 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms