Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDRT1O95170 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.11■□□□□ 0.49
CDRT1O95170 AC131281.2-201ENST00000520478 145 ntBASIC18.11■□□□□ 0.49
CDRT1O95170 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.11■□□□□ 0.49
CDRT1O95170 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.11■□□□□ 0.49
CDRT1O95170 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.11■□□□□ 0.49
CDRT1O95170 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.11■□□□□ 0.49
CDRT1O95170 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDRT1O95170 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.11■□□□□ 0.49
CDRT1O95170 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDRT1O95170 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.1■□□□□ 0.49
CDRT1O95170 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.1■□□□□ 0.49
CDRT1O95170 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 AC092720.2-201ENST00000602388 1665 ntBASIC18.1■□□□□ 0.49
CDRT1O95170 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
CDRT1O95170 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.1■□□□□ 0.49
CDRT1O95170 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.1■□□□□ 0.49
CDRT1O95170 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
CDRT1O95170 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.1■□□□□ 0.49
CDRT1O95170 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
CDRT1O95170 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
CDRT1O95170 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDRT1O95170 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.09■□□□□ 0.49
CDRT1O95170 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDRT1O95170 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDRT1O95170 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDRT1O95170 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.09■□□□□ 0.49
CDRT1O95170 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDRT1O95170 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.09■□□□□ 0.49
CDRT1O95170 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CDRT1O95170 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDRT1O95170 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.08■□□□□ 0.49
CDRT1O95170 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.08■□□□□ 0.49
CDRT1O95170 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDRT1O95170 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDRT1O95170 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.08■□□□□ 0.49
CDRT1O95170 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.08■□□□□ 0.48
CDRT1O95170 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDRT1O95170 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.08■□□□□ 0.48
CDRT1O95170 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.08■□□□□ 0.48
CDRT1O95170 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDRT1O95170 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDRT1O95170 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CDRT1O95170 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDRT1O95170 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.08■□□□□ 0.48
CDRT1O95170 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDRT1O95170 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDRT1O95170 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDRT1O95170 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDRT1O95170 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms