Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.34■□□□□ 0.85
GPC4O75487 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.34■□□□□ 0.85
GPC4O75487 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC4O75487 TERF1P5-201ENST00000477545 1207 ntBASIC20.34■□□□□ 0.85
GPC4O75487 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.34■□□□□ 0.85
GPC4O75487 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GPC4O75487 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GPC4O75487 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GPC4O75487 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 AC092667.1-201ENST00000434301 2586 ntBASIC20.34■□□□□ 0.85
GPC4O75487 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
GPC4O75487 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.33■□□□□ 0.85
GPC4O75487 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
GPC4O75487 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.33■□□□□ 0.85
GPC4O75487 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC4O75487 AC091799.1-201ENST00000422823 811 ntBASIC20.33■□□□□ 0.85
GPC4O75487 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC4O75487 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
GPC4O75487 AC011767.1-201ENST00000617410 1153 ntBASIC20.33■□□□□ 0.85
GPC4O75487 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GPC4O75487 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC4O75487 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC4O75487 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GPC4O75487 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
GPC4O75487 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GPC4O75487 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.33■□□□□ 0.84
GPC4O75487 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
GPC4O75487 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
GPC4O75487 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 DUX4L16-201ENST00000555130 1264 ntBASIC20.32■□□□□ 0.84
GPC4O75487 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.32■□□□□ 0.84
GPC4O75487 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
GPC4O75487 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 BID-214ENST00000617586 542 ntTSL 5 BASIC20.32■□□□□ 0.84
GPC4O75487 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC4O75487 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GPC4O75487 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC4O75487 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.31■□□□□ 0.84
GPC4O75487 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
GPC4O75487 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
GPC4O75487 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
GPC4O75487 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC4O75487 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.31■□□□□ 0.84
GPC4O75487 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.31■□□□□ 0.84
GPC4O75487 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GPC4O75487 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GPC4O75487 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
GPC4O75487 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC4O75487 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GPC4O75487 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.3■□□□□ 0.84
GPC4O75487 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC4O75487 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.3■□□□□ 0.84
GPC4O75487 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.3■□□□□ 0.84
GPC4O75487 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 GABARAPL3-202ENST00000624044 1851 ntBASIC20.3■□□□□ 0.84
GPC4O75487 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms