Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.04■□□□□ 0.96
ATP9BO43861 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.04■□□□□ 0.96
ATP9BO43861 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.04■□□□□ 0.96
ATP9BO43861 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ATP9BO43861 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP9BO43861 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP9BO43861 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
ATP9BO43861 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP9BO43861 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP9BO43861 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP9BO43861 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP9BO43861 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ATP9BO43861 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP9BO43861 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP9BO43861 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP9BO43861 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.03■□□□□ 0.96
ATP9BO43861 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP9BO43861 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP9BO43861 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP9BO43861 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP9BO43861 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
ATP9BO43861 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
ATP9BO43861 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP9BO43861 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP9BO43861 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP9BO43861 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP9BO43861 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP9BO43861 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ATP9BO43861 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 AC007322.3-201ENST00000426526 701 ntBASIC21.02■□□□□ 0.96
ATP9BO43861 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.02■□□□□ 0.96
ATP9BO43861 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP9BO43861 AC098934.4-201ENST00000564127 592 ntBASIC21.02■□□□□ 0.96
ATP9BO43861 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
ATP9BO43861 AC092118.2-201ENST00000613495 667 ntBASIC21.02■□□□□ 0.96
ATP9BO43861 AC100791.3-201ENST00000617619 330 ntBASIC21.02■□□□□ 0.96
ATP9BO43861 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
ATP9BO43861 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP9BO43861 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ATP9BO43861 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP9BO43861 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP9BO43861 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP9BO43861 AC121338.2-201ENST00000622535 1744 ntBASIC21.01■□□□□ 0.95
ATP9BO43861 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP9BO43861 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP9BO43861 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP9BO43861 BX276092.2-201ENST00000417668 665 ntBASIC21.01■□□□□ 0.95
ATP9BO43861 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP9BO43861 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.01■□□□□ 0.95
ATP9BO43861 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP9BO43861 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP9BO43861 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP9BO43861 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.01■□□□□ 0.95
ATP9BO43861 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP9BO43861 AC006128.1-201ENST00000624704 1661 ntBASIC21.01■□□□□ 0.95
ATP9BO43861 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP9BO43861 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP9BO43861 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ATP9BO43861 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP9BO43861 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP9BO43861 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ATP9BO43861 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21■□□□□ 0.95
ATP9BO43861 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21■□□□□ 0.95
ATP9BO43861 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21■□□□□ 0.95
ATP9BO43861 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP9BO43861 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATP9BO43861 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP9BO43861 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21■□□□□ 0.95
ATP9BO43861 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms