Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.18■□□□□ 0.98
MSI1O43347 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
MSI1O43347 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSI1O43347 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 PKD1P6-201ENST00000343738 4769 ntBASIC21.17■□□□□ 0.98
MSI1O43347 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
MSI1O43347 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.17■□□□□ 0.98
MSI1O43347 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.17■□□□□ 0.98
MSI1O43347 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.17■□□□□ 0.98
MSI1O43347 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.17■□□□□ 0.98
MSI1O43347 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MSI1O43347 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
MSI1O43347 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSI1O43347 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MSI1O43347 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.16■□□□□ 0.98
MSI1O43347 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.16■□□□□ 0.98
MSI1O43347 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.16■□□□□ 0.98
MSI1O43347 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.16■□□□□ 0.98
MSI1O43347 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MSI1O43347 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 KRT8P36-201ENST00000489121 1440 ntBASIC21.16■□□□□ 0.98
MSI1O43347 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.16■□□□□ 0.98
MSI1O43347 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 MIR4651-201ENST00000582622 73 ntBASIC21.16■□□□□ 0.98
MSI1O43347 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.16■□□□□ 0.98
MSI1O43347 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSI1O43347 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
MSI1O43347 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.15■□□□□ 0.98
MSI1O43347 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.15■□□□□ 0.98
MSI1O43347 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.15■□□□□ 0.98
MSI1O43347 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.15■□□□□ 0.98
MSI1O43347 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.15■□□□□ 0.98
MSI1O43347 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.15■□□□□ 0.98
MSI1O43347 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.15■□□□□ 0.98
MSI1O43347 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.15■□□□□ 0.98
MSI1O43347 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.15■□□□□ 0.98
MSI1O43347 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MSI1O43347 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSI1O43347 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.15■□□□□ 0.98
MSI1O43347 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSI1O43347 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.14■□□□□ 0.98
MSI1O43347 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSI1O43347 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSI1O43347 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSI1O43347 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MSI1O43347 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.14■□□□□ 0.97
MSI1O43347 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
MSI1O43347 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.14■□□□□ 0.97
MSI1O43347 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.14■□□□□ 0.97
MSI1O43347 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.14■□□□□ 0.97
MSI1O43347 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.14■□□□□ 0.97
MSI1O43347 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.14■□□□□ 0.97
MSI1O43347 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
MSI1O43347 C2orf69P4-201ENST00000565394 541 ntBASIC21.14■□□□□ 0.97
MSI1O43347 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.14■□□□□ 0.97
MSI1O43347 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.14■□□□□ 0.97
MSI1O43347 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MSI1O43347 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSI1O43347 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSI1O43347 AC007225.1-201ENST00000566331 1836 ntBASIC21.13■□□□□ 0.97
MSI1O43347 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSI1O43347 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSI1O43347 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.13■□□□□ 0.97
MSI1O43347 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms