Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.53■□□□□ 0.4
PHF1O43189 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHF1O43189 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.53■□□□□ 0.4
PHF1O43189 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
PHF1O43189 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHF1O43189 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.52■□□□□ 0.4
PHF1O43189 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHF1O43189 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.52■□□□□ 0.4
PHF1O43189 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.52■□□□□ 0.4
PHF1O43189 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.52■□□□□ 0.4
PHF1O43189 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHF1O43189 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.52■□□□□ 0.4
PHF1O43189 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHF1O43189 AC105036.2-201ENST00000569468 176 ntBASIC17.52■□□□□ 0.4
PHF1O43189 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHF1O43189 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHF1O43189 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.52■□□□□ 0.4
PHF1O43189 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PHF1O43189 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.52■□□□□ 0.4
PHF1O43189 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PHF1O43189 FEM1AP1-201ENST00000431297 1995 ntBASIC17.51■□□□□ 0.39
PHF1O43189 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.51■□□□□ 0.39
PHF1O43189 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PHF1O43189 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PHF1O43189 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PHF1O43189 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.51■□□□□ 0.39
PHF1O43189 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.51■□□□□ 0.39
PHF1O43189 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PHF1O43189 KRT18P20-201ENST00000548986 1279 ntBASIC17.51■□□□□ 0.39
PHF1O43189 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PHF1O43189 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.51■□□□□ 0.39
PHF1O43189 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PHF1O43189 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PHF1O43189 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PHF1O43189 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PHF1O43189 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.5■□□□□ 0.39
PHF1O43189 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.5■□□□□ 0.39
PHF1O43189 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.5■□□□□ 0.39
PHF1O43189 AC008175.2-201ENST00000612840 297 ntBASIC17.5■□□□□ 0.39
PHF1O43189 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 AL049796.1-201ENST00000565336 1766 ntBASIC17.5■□□□□ 0.39
PHF1O43189 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PHF1O43189 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PHF1O43189 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PHF1O43189 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PHF1O43189 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.49■□□□□ 0.39
PHF1O43189 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PHF1O43189 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.49■□□□□ 0.39
PHF1O43189 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.49■□□□□ 0.39
PHF1O43189 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PHF1O43189 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
PHF1O43189 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.49■□□□□ 0.39
PHF1O43189 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.49■□□□□ 0.39
PHF1O43189 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
PHF1O43189 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.49■□□□□ 0.39
PHF1O43189 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.49■□□□□ 0.39
PHF1O43189 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.49■□□□□ 0.39
PHF1O43189 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHF1O43189 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHF1O43189 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PHF1O43189 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms