Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RTL8CO15255 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL8CO15255 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RTL8CO15255 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RTL8CO15255 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.61□□□□□ -0.23
RTL8CO15255 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
RTL8CO15255 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.61□□□□□ -0.23
RTL8CO15255 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.61□□□□□ -0.23
RTL8CO15255 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.61□□□□□ -0.23
RTL8CO15255 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RTL8CO15255 CD177P1-201ENST00000606252 935 ntBASIC13.61□□□□□ -0.23
RTL8CO15255 AL353708.3-201ENST00000610272 989 ntBASIC13.61□□□□□ -0.23
RTL8CO15255 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 AC087633.2-202ENST00000565166 1439 ntBASIC13.61□□□□□ -0.23
RTL8CO15255 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC13.61□□□□□ -0.23
RTL8CO15255 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.61□□□□□ -0.23
RTL8CO15255 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RTL8CO15255 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.6□□□□□ -0.23
RTL8CO15255 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.6□□□□□ -0.23
RTL8CO15255 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.6□□□□□ -0.23
RTL8CO15255 RN7SL850P-201ENST00000579959 291 ntBASIC13.6□□□□□ -0.23
RTL8CO15255 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.6□□□□□ -0.23
RTL8CO15255 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.6□□□□□ -0.23
RTL8CO15255 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RTL8CO15255 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RTL8CO15255 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTL8CO15255 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RTL8CO15255 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.59□□□□□ -0.23
RTL8CO15255 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.59□□□□□ -0.23
RTL8CO15255 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.59□□□□□ -0.23
RTL8CO15255 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 KRT18P35-201ENST00000510488 1269 ntBASIC13.59□□□□□ -0.23
RTL8CO15255 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.59□□□□□ -0.23
RTL8CO15255 AC026471.5-201ENST00000615068 467 ntBASIC13.59□□□□□ -0.23
RTL8CO15255 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.59□□□□□ -0.23
RTL8CO15255 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RTL8CO15255 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RTL8CO15255 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RTL8CO15255 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RTL8CO15255 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RTL8CO15255 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.58□□□□□ -0.23
RTL8CO15255 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RTL8CO15255 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RTL8CO15255 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RTL8CO15255 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.58□□□□□ -0.24
RTL8CO15255 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.58□□□□□ -0.24
RTL8CO15255 AL390719.1-204ENST00000412397 1219 ntBASIC13.58□□□□□ -0.24
RTL8CO15255 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.58□□□□□ -0.24
RTL8CO15255 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
RTL8CO15255 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.58□□□□□ -0.24
RTL8CO15255 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RTL8CO15255 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RTL8CO15255 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.58□□□□□ -0.24
RTL8CO15255 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RTL8CO15255 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RTL8CO15255 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms