Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NPC1O15118 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NPC1O15118 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.63■□□□□ 0.89
NPC1O15118 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1O15118 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1O15118 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NPC1O15118 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.63■□□□□ 0.89
NPC1O15118 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1O15118 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.63■□□□□ 0.89
NPC1O15118 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.63■□□□□ 0.89
NPC1O15118 AC120498.8-201ENST00000614275 531 ntBASIC20.63■□□□□ 0.89
NPC1O15118 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1O15118 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
NPC1O15118 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1O15118 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NPC1O15118 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1O15118 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1O15118 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1O15118 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1O15118 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1O15118 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NPC1O15118 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1O15118 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1O15118 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NPC1O15118 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
NPC1O15118 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NPC1O15118 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NPC1O15118 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1O15118 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1O15118 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.61■□□□□ 0.89
NPC1O15118 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.61■□□□□ 0.89
NPC1O15118 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.61■□□□□ 0.89
NPC1O15118 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.61■□□□□ 0.89
NPC1O15118 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.61■□□□□ 0.89
NPC1O15118 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.61■□□□□ 0.89
NPC1O15118 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.61■□□□□ 0.89
NPC1O15118 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPC1O15118 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NPC1O15118 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NPC1O15118 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1O15118 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NPC1O15118 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.6■□□□□ 0.89
NPC1O15118 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPC1O15118 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.6■□□□□ 0.89
NPC1O15118 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPC1O15118 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPC1O15118 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPC1O15118 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.59■□□□□ 0.89
NPC1O15118 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.59■□□□□ 0.89
NPC1O15118 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NPC1O15118 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.59■□□□□ 0.89
NPC1O15118 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPC1O15118 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPC1O15118 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1O15118 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
NPC1O15118 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.58■□□□□ 0.89
NPC1O15118 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
NPC1O15118 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1O15118 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.58■□□□□ 0.89
NPC1O15118 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1O15118 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms