Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 AL138724.1-201ENST00000606771 1088 ntBASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MEIS3P1A6NDR6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 AP000974.1-201ENST00000623909 2387 ntBASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MEIS3P1A6NDR6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 AC055733.4-201ENST00000638462 1354 ntBASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
MEIS3P1A6NDR6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
MEIS3P1A6NDR6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MEIS3P1A6NDR6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.39■□□□□ 0.38
MEIS3P1A6NDR6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MEIS3P1A6NDR6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MEIS3P1A6NDR6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MEIS3P1A6NDR6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 AC004408.2-201ENST00000623613 2777 ntBASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MEIS3P1A6NDR6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms