Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 IKBKGP1-201ENST00000612193 1073 ntBASIC18.6■□□□□ 0.57
ZC3H12DA2A288 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 FP700111.2-201ENST00000619190 1892 ntBASIC18.6■□□□□ 0.57
ZC3H12DA2A288 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 AC092437.1-201ENST00000624794 1048 ntBASIC18.59■□□□□ 0.57
ZC3H12DA2A288 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H12DA2A288 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ZC3H12DA2A288 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H12DA2A288 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H12DA2A288 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
ZC3H12DA2A288 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H12DA2A288 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
ZC3H12DA2A288 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZC3H12DA2A288 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 AC020907.5-201ENST00000624372 1936 ntBASIC18.57■□□□□ 0.56
ZC3H12DA2A288 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 DUX4L16-201ENST00000555130 1264 ntBASIC18.57■□□□□ 0.56
ZC3H12DA2A288 AL121603.2-201ENST00000557373 2117 ntBASIC18.57■□□□□ 0.56
ZC3H12DA2A288 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ZC3H12DA2A288 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.56■□□□□ 0.56
ZC3H12DA2A288 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms