Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC125437.2-201ENST00000625180 2167 ntBASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SLC7A5P2-201ENST00000553010 536 ntBASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV4-1A0A0J9YWV2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 IRS3P-201ENST00000223076 1006 ntBASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC120498.10-201ENST00000621827 505 ntBASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV4-1A0A0J9YWV2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.64■□□□□ 0.58
TRBV4-1A0A0J9YWV2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV4-1A0A0J9YWV2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV4-1A0A0J9YWV2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 RNF165-205ENST00000588679 2904 ntBASIC18.63■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC104187.1-201ENST00000607510 612 ntBASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms