Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AL158211.5-201ENST00000623583 2518 ntBASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC125437.2-201ENST00000625180 2167 ntBASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 UNC93B3-201ENST00000308076 687 ntBASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AL136116.3-201ENST00000402907 1138 ntBASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC024257.2-201ENST00000549699 147 ntBASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 EEF1DP3-203ENST00000566025 782 ntBASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC008764.7-201ENST00000593779 1081 ntBASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TSPY26P-201ENST00000476365 1326 ntBASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms