Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC012306.2-201ENST00000609350 630 ntBASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC026471.5-201ENST00000615068 467 ntBASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AP003071.4-201ENST00000562276 1284 ntBASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AL355355.2-201ENST00000442321 338 ntBASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AL353708.3-201ENST00000610272 989 ntBASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 HTR7P1-201ENST00000538670 1336 ntBASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms