Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 DPP3P2-201ENST00000416030 1696 ntBASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC116562.4-201ENST00000641316 2276 ntBASIC19.11■□□□□ 0.65
TRBV5-3A0A0A0MS03 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 AL691432.2-201ENST00000607222 2038 ntBASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 SLC7A5P1-201ENST00000568957 537 ntBASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 TERF1P2-201ENST00000583350 1212 ntBASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 BX119927.1-201ENST00000636596 1552 ntBASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV5-3A0A0A0MS03 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC007322.3-201ENST00000426526 701 ntBASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 AC105265.2-201ENST00000467189 838 ntBASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV5-3A0A0A0MS03 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 TMEM179-206ENST00000616017 1645 ntBASIC19.08■□□□□ 0.65
TRBV5-3A0A0A0MS03 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV5-3A0A0A0MS03 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 AC123595.1-201ENST00000440769 1046 ntBASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV5-3A0A0A0MS03 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms