Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CCL4L2-211ENST00000613173 741 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 AC091953.4-201ENST00000625179 341 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 AF121897.1-201ENST00000411867 3980 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 AC008514.2-201ENST00000522096 1337 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 TRIM64FP-201ENST00000427305 1371 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 AC026356.1-201ENST00000622688 1357 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.95□□□□□ -0.98
SLC1A1P43005 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
SLC1A1P43005 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
SLC1A1P43005 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SLC1A1P43005 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 AKR1B1P1-201ENST00000429105 956 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.94□□□□□ -0.98
SLC1A1P43005 RBMY2OP-201ENST00000447105 810 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 RN7SL757P-201ENST00000466709 301 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 RBM48P1-201ENST00000509661 1102 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 RNA5SP101-201ENST00000517036 108 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 OR7E8P-201ENST00000532847 1000 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC8.94□□□□□ -0.98
SLC1A1P43005 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC110027.1-201ENST00000557753 403 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC090774.3-201ENST00000578666 742 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 RN7SL203P-201ENST00000579600 296 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC010776.1-201ENST00000588298 542 ntTSL 4 BASIC8.94□□□□□ -0.98
SLC1A1P43005 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC8.94□□□□□ -0.98
SLC1A1P43005 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.94□□□□□ -0.98
SLC1A1P43005 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.94□□□□□ -0.98
SLC1A1P43005 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.94□□□□□ -0.98
SLC1A1P43005 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 AC007126.1-201ENST00000508202 4781 ntBASIC8.94□□□□□ -0.98
SLC1A1P43005 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
SLC1A1P43005 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SLC1A1P43005 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
SLC1A1P43005 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.93□□□□□ -0.98
SLC1A1P43005 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
SLC1A1P43005 HLA-DRA-201ENST00000374982 1169 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SLC1A1P43005 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 AC009319.1-201ENST00000411493 754 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC8.93□□□□□ -0.98
SLC1A1P43005 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC8.93□□□□□ -0.98
SLC1A1P43005 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC8.93□□□□□ -0.98
SLC1A1P43005 AC013399.1-201ENST00000450311 418 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SLC1A1P43005 FTLP18-201ENST00000453860 523 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC8.93□□□□□ -0.98
SLC1A1P43005 AL391825.1-202ENST00000458136 741 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 RPS10P16-201ENST00000483812 496 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 TDGF1P3-201ENST00000493351 567 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.93□□□□□ -0.98
SLC1A1P43005 AC100849.1-203ENST00000518417 723 ntTSL 4 BASIC8.93□□□□□ -0.98
SLC1A1P43005 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms