Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FAM238B-204ENST00000612040 423 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 AC011472.5-201ENST00000624079 508 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC9.02□□□□□ -0.97
SLC1A1P43005 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC9.02□□□□□ -0.97
SLC1A1P43005 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 USP46-207ENST00000508499 1419 ntTSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
SLC1A1P43005 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 LINC01992-201ENST00000567574 1340 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SLC1A1P43005 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SLC1A1P43005 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 RNA5SP74-201ENST00000363538 109 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SLC1A1P43005 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 RN7SKP264-201ENST00000411080 289 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC9.01□□□□□ -0.97
SLC1A1P43005 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AL138720.1-202ENST00000437648 1017 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 ASS1P11-201ENST00000441309 1216 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 CRIP1P4-201ENST00000442565 229 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 RN7SL659P-201ENST00000483093 299 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 AC093768.1-201ENST00000505987 2173 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 LINC02222-201ENST00000513535 1039 ntTSL 4 BASIC9.01□□□□□ -0.97
SLC1A1P43005 WT1-AS-206ENST00000525436 1254 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC078927.1-201ENST00000539652 984 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC9.01□□□□□ -0.97
SLC1A1P43005 LINC02445-201ENST00000551387 459 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 OR7E159P-201ENST00000553761 298 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 ENSAP2-201ENST00000554405 352 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 RPL23AP86-201ENST00000573796 541 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC9.01□□□□□ -0.97
SLC1A1P43005 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 AC127381.3-201ENST00000622901 303 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SLC1A1P43005 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SLC1A1P43005 AC245060.6-201ENST00000624350 8420 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 AL391666.1-201ENST00000442570 2764 ntBASIC9.01□□□□□ -0.97
SLC1A1P43005 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SLC1A1P43005 MAPK10-301ENST00000641313 2482 ntBASIC9□□□□□ -0.97
SLC1A1P43005 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 NLRP9P1-201ENST00000540920 2655 ntBASIC9□□□□□ -0.97
SLC1A1P43005 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC9□□□□□ -0.97
SLC1A1P43005 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SLC1A1P43005 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC9□□□□□ -0.97
SLC1A1P43005 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms