Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC9.21□□□□□ -0.94
MTHFRP42898 AC245505.3-201ENST00000616788 358 ntBASIC9.21□□□□□ -0.94
MTHFRP42898 AC100757.2-201ENST00000622316 280 ntBASIC9.21□□□□□ -0.94
MTHFRP42898 AL121785.1-201ENST00000624745 708 ntBASIC9.21□□□□□ -0.94
MTHFRP42898 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC9.21□□□□□ -0.94
MTHFRP42898 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC9.21□□□□□ -0.94
MTHFRP42898 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 AC002540.1-201ENST00000625023 1349 ntBASIC9.21□□□□□ -0.94
MTHFRP42898 MARK3-207ENST00000553942 2298 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
MTHFRP42898 AL049869.1-201ENST00000556933 1402 ntBASIC9.21□□□□□ -0.94
MTHFRP42898 PUS3-205ENST00000613398 1419 ntTSL 2 BASIC9.21□□□□□ -0.94
MTHFRP42898 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC9.21□□□□□ -0.94
MTHFRP42898 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 LRRTM2-202ENST00000518785 1958 ntTSL 2 BASIC9.21□□□□□ -0.94
MTHFRP42898 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC9.21□□□□□ -0.94
MTHFRP42898 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
MTHFRP42898 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC9.21□□□□□ -0.94
MTHFRP42898 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC020951.1-201ENST00000624361 2271 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 AL008638.6-201ENST00000623947 4254 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 SNORA14B-201ENST00000384452 135 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 GNAI2P2-201ENST00000417003 916 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC9.2□□□□□ -0.94
MTHFRP42898 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 CD302-202ENST00000429078 3803 ntTSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC114492.1-201ENST00000434936 454 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AC004006.1-201ENST00000434994 377 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AL356277.3-202ENST00000436672 587 ntTSL 3 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC010099.2-201ENST00000443177 373 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 GAPDHP22-201ENST00000491037 413 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 PGAM1P9-201ENST00000503887 755 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 RNU4ATAC12P-201ENST00000516460 113 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC9.2□□□□□ -0.94
MTHFRP42898 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC9.2□□□□□ -0.94
MTHFRP42898 HNRNPKP3-202ENST00000533565 589 ntTSL 4 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC9.2□□□□□ -0.94
MTHFRP42898 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 AC096708.1-201ENST00000584419 658 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AC025031.3-201ENST00000611566 368 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AC244255.1-201ENST00000613463 398 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 CDK2AP2P1-201ENST00000617479 328 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AC011389.3-201ENST00000623273 999 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 AL356095.2-201ENST00000624025 457 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 LYG2-206ENST00000626374 650 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
MTHFRP42898 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
MTHFRP42898 ADAM21P1-201ENST00000529267 2170 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
MTHFRP42898 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 SIAH1-201ENST00000356721 2415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 AC114689.1-201ENST00000578727 2484 ntBASIC9.2□□□□□ -0.94
MTHFRP42898 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
MTHFRP42898 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MTHFRP42898 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
MTHFRP42898 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MTHFRP42898 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MTHFRP42898 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC9.19□□□□□ -0.94
MTHFRP42898 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
MTHFRP42898 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
MTHFRP42898 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC9.19□□□□□ -0.94
MTHFRP42898 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC9.19□□□□□ -0.94
MTHFRP42898 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms