Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 IL24-201ENST00000294984 1701 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AL008638.6-201ENST00000623947 4254 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC245452.3-201ENST00000413294 162 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 RBM22P7-201ENST00000421321 280 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 SUMO2P8-201ENST00000434672 286 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AP002383.1-201ENST00000439405 720 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 RN7SL841P-201ENST00000470547 297 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 RPL10AP1-201ENST00000490023 643 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 WBP1LP2-201ENST00000515260 998 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 PRR13P2-201ENST00000533804 406 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC018448.2-201ENST00000548295 305 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC090774.2-201ENST00000584708 322 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC007216.5-201ENST00000612457 109 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AC138932.4-201ENST00000619102 109 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AC138969.4-201ENST00000620593 109 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 AC018558.4-201ENST00000622153 281 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AP000356.4-201ENST00000639500 172 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 AC025031.5-201ENST00000623851 2523 ntBASIC8.8□□□□□ -1
NCDNQ9UBB6 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NCDNQ9UBB6 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
NCDNQ9UBB6 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC8.8□□□□□ -1
NCDNQ9UBB6 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NCDNQ9UBB6 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC8.79□□□□□ -1
NCDNQ9UBB6 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC8.79□□□□□ -1
NCDNQ9UBB6 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NCDNQ9UBB6 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
NCDNQ9UBB6 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NCDNQ9UBB6 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC8.79□□□□□ -1
NCDNQ9UBB6 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.79□□□□□ -1
NCDNQ9UBB6 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
NCDNQ9UBB6 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
NCDNQ9UBB6 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.79□□□□□ -1
NCDNQ9UBB6 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NCDNQ9UBB6 RNA5-8SP2-201ENST00000363564 152 ntBASIC8.79□□□□□ -1
NCDNQ9UBB6 RPL35P3-201ENST00000403133 371 ntBASIC8.79□□□□□ -1
NCDNQ9UBB6 RN7SKP136-201ENST00000410927 300 ntBASIC8.79□□□□□ -1
NCDNQ9UBB6 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC8.79□□□□□ -1
NCDNQ9UBB6 RBMY2YP-201ENST00000423333 912 ntBASIC8.79□□□□□ -1
NCDNQ9UBB6 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC8.79□□□□□ -1
NCDNQ9UBB6 AL135929.1-201ENST00000449287 552 ntBASIC8.79□□□□□ -1
NCDNQ9UBB6 HNRNPA1P43-201ENST00000452680 910 ntBASIC8.79□□□□□ -1
NCDNQ9UBB6 RN7SL749P-201ENST00000460421 290 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms