RNA–Protein interactions for RNA: ENST00000403133.1

RPL35P3-201, Transcript of ribosomal protein L35 pseudogene 3, humanhuman

BASIC

Gene RPL35P3, Length 371 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P3-201ENST00000403133 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
RPL35P3-201ENST00000403133 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
RPL35P3-201ENST00000403133 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
RPL35P3-201ENST00000403133 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
RPL35P3-201ENST00000403133 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
RPL35P3-201ENST00000403133 FOXD1Q16676 465 aa23■■□□□ 1.27
RPL35P3-201ENST00000403133 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
RPL35P3-201ENST00000403133 ADRA2BP18089 450 aa22.04■■□□□ 1.12
RPL35P3-201ENST00000403133 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
RPL35P3-201ENST00000403133 PIAS4Q8N2W9 510 aaPredicted RBP21.69■■□□□ 1.06
RPL35P3-201ENST00000403133 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
RPL35P3-201ENST00000403133 MSH5O43196 834 aa21.32■■□□□ 1
RPL35P3-201ENST00000403133 PPP4R3CPQ6ZMV5 832 aa20.35■□□□□ 0.85
RPL35P3-201ENST00000403133 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
RPL35P3-201ENST00000403133 MAPK8IP2Q13387 824 aaPredicted RBP19.98■□□□□ 0.79
RPL35P3-201ENST00000403133 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
RPL35P3-201ENST00000403133 CNKSR2Q8WXI2 1034 aa19.83■□□□□ 0.77
RPL35P3-201ENST00000403133 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
RPL35P3-201ENST00000403133 KCNA4P22459 653 aa19.78■□□□□ 0.76
RPL35P3-201ENST00000403133 NPM3O75607 178 aaKnown RBP19.49■□□□□ 0.71
RPL35P3-201ENST00000403133 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
RPL35P3-201ENST00000403133 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
RPL35P3-201ENST00000403133 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
RPL35P3-201ENST00000403133 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
RPL35P3-201ENST00000403133 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
RPL35P3-201ENST00000403133 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
RPL35P3-201ENST00000403133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
RPL35P3-201ENST00000403133 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
RPL35P3-201ENST00000403133 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
RPL35P3-201ENST00000403133 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
RPL35P3-201ENST00000403133 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
RPL35P3-201ENST00000403133 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
RPL35P3-201ENST00000403133 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
RPL35P3-201ENST00000403133 ZBTB22O15209 634 aa18.17■□□□□ 0.5
RPL35P3-201ENST00000403133 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
RPL35P3-201ENST00000403133 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
RPL35P3-201ENST00000403133 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
RPL35P3-201ENST00000403133 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
RPL35P3-201ENST00000403133 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
RPL35P3-201ENST00000403133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
RPL35P3-201ENST00000403133 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
RPL35P3-201ENST00000403133 ABCC9O60706 1549 aa17.98■□□□□ 0.47
RPL35P3-201ENST00000403133 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
RPL35P3-201ENST00000403133 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
RPL35P3-201ENST00000403133 APLP2Q06481 763 aa17.85■□□□□ 0.45
RPL35P3-201ENST00000403133 NACADO15069 1562 aa17.79■□□□□ 0.44
RPL35P3-201ENST00000403133 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
RPL35P3-201ENST00000403133 ATXN8OSP0DMR3 200 aa17.71■□□□□ 0.43
RPL35P3-201ENST00000403133 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
RPL35P3-201ENST00000403133 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
RPL35P3-201ENST00000403133 CAPN15O75808 1086 aa17.58■□□□□ 0.4
RPL35P3-201ENST00000403133 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
RPL35P3-201ENST00000403133 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
RPL35P3-201ENST00000403133 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
RPL35P3-201ENST00000403133 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
RPL35P3-201ENST00000403133 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
RPL35P3-201ENST00000403133 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
RPL35P3-201ENST00000403133 DSG3P32926 999 aa17.3■□□□□ 0.36
RPL35P3-201ENST00000403133 ABCB7O75027 752 aa17.19■□□□□ 0.34
RPL35P3-201ENST00000403133 POLA2Q14181 598 aa17.18■□□□□ 0.34
RPL35P3-201ENST00000403133 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
RPL35P3-201ENST00000403133 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
RPL35P3-201ENST00000403133 FBLN2P98095 1184 aa16.88■□□□□ 0.29
RPL35P3-201ENST00000403133 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
RPL35P3-201ENST00000403133 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
RPL35P3-201ENST00000403133 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
RPL35P3-201ENST00000403133 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
RPL35P3-201ENST00000403133 SMARCA4P51532 1647 aa16.77■□□□□ 0.27
RPL35P3-201ENST00000403133 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.27
RPL35P3-201ENST00000403133 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
RPL35P3-201ENST00000403133 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
RPL35P3-201ENST00000403133 POTEHQ6S545 545 aa16.71■□□□□ 0.27
RPL35P3-201ENST00000403133 WIZO95785 1651 aa16.64■□□□□ 0.25
RPL35P3-201ENST00000403133 PEG3Q9GZU2 1588 aa16.63■□□□□ 0.25
RPL35P3-201ENST00000403133 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
RPL35P3-201ENST00000403133 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
RPL35P3-201ENST00000403133 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
RPL35P3-201ENST00000403133 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
RPL35P3-201ENST00000403133 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
RPL35P3-201ENST00000403133 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
RPL35P3-201ENST00000403133 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
RPL35P3-201ENST00000403133 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
RPL35P3-201ENST00000403133 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
RPL35P3-201ENST00000403133 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
RPL35P3-201ENST00000403133 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
RPL35P3-201ENST00000403133 ZNF692Q9BU19 519 aaPredicted RBP16.39■□□□□ 0.21
RPL35P3-201ENST00000403133 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
RPL35P3-201ENST00000403133 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
RPL35P3-201ENST00000403133 SSUH2Q9Y2M2 353 aa16.35■□□□□ 0.21
RPL35P3-201ENST00000403133 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
RPL35P3-201ENST00000403133 FKBP8Q14318 412 aa16.33■□□□□ 0.2
RPL35P3-201ENST00000403133 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
RPL35P3-201ENST00000403133 CCDC88BA6NC98 1476 aa16.28■□□□□ 0.2
RPL35P3-201ENST00000403133 PROM2Q8N271 834 aa16.15■□□□□ 0.18
RPL35P3-201ENST00000403133 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
RPL35P3-201ENST00000403133 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
RPL35P3-201ENST00000403133 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
RPL35P3-201ENST00000403133 CFTRP13569 1480 aa15.97■□□□□ 0.15
RPL35P3-201ENST00000403133 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
RPL35P3-201ENST00000403133 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 445.8 ms