Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 C17orf82-201ENST00000623772 1530 ntBASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 AIRN-201ENST00000601203 4374 ntBASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 AL513477.1-201ENST00000602865 2407 ntBASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 HR-201ENST00000312841 5351 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 AC068880.1-201ENST00000507289 2297 ntBASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 AC018755.3-202ENST00000596210 929 ntBASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01558Q9Y6Z2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01558Q9Y6Z2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms