Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 AL109923.1-201ENST00000618799 583 ntBASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 AC011484.1-201ENST00000377652 1995 ntBASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 AL512625.2-201ENST00000417533 625 ntBASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 HLA-L-209ENST00000420110 1011 ntBASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 AC121338.2-201ENST00000622535 1744 ntBASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 MKRN4P-201ENST00000444706 1521 ntBASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 AC093787.1-201ENST00000450396 207 ntBASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms