Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCA3PQ9Y6N3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 AL109923.1-201ENST00000618799 583 ntBASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCA3PQ9Y6N3 AC011484.1-201ENST00000377652 1995 ntBASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 AL512625.2-201ENST00000417533 625 ntBASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCA3PQ9Y6N3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 HLA-L-209ENST00000420110 1011 ntBASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCA3PQ9Y6N3 AC121338.2-201ENST00000622535 1744 ntBASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 MKRN4P-201ENST00000444706 1521 ntBASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCA3PQ9Y6N3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 AC093787.1-201ENST00000450396 207 ntBASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCA3PQ9Y6N3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms