Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RARRES2P4-201ENST00000514074 484 ntBASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 BX276092.2-201ENST00000417668 665 ntBASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HRH3Q9Y5N1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 FAM201B-201ENST00000458407 597 ntBASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 AL162412.1-201ENST00000567129 965 ntBASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 AC069236.1-201ENST00000604339 616 ntBASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 AC092118.2-201ENST00000613495 667 ntBASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 AC008694.1-202ENST00000636953 945 ntBASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HRH3Q9Y5N1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 AL355472.2-201ENST00000422958 438 ntBASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 AC007322.3-201ENST00000426526 701 ntBASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 RNA5SP413-201ENST00000516373 109 ntBASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 PLK5-205ENST00000642079 1969 ntBASIC18.79■□□□□ 0.6
HRH3Q9Y5N1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 AC008687.6-201ENST00000596318 630 ntBASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 FAM21FP-204ENST00000608637 956 ntBASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HRH3Q9Y5N1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
HRH3Q9Y5N1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HRH3Q9Y5N1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HRH3Q9Y5N1 AC010980.2-201ENST00000587099 1412 ntBASIC18.77■□□□□ 0.6
HRH3Q9Y5N1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HRH3Q9Y5N1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms