Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.34■■□□□ 1.81
PDZRN3Q9UPQ7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.34■■□□□ 1.81
PDZRN3Q9UPQ7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.34■■□□□ 1.81
PDZRN3Q9UPQ7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDZRN3Q9UPQ7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.34■■□□□ 1.81
PDZRN3Q9UPQ7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 LSM12P1-201ENST00000411836 588 ntBASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDZRN3Q9UPQ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
PDZRN3Q9UPQ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PDZRN3Q9UPQ7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDZRN3Q9UPQ7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 AC073130.3-201ENST00000624389 2278 ntBASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDZRN3Q9UPQ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 MIR718-201ENST00000390190 70 ntBASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 AC100791.3-201ENST00000617619 330 ntBASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDZRN3Q9UPQ7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDZRN3Q9UPQ7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 AC060766.5-201ENST00000590539 871 ntBASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 AL359736.2-201ENST00000621992 437 ntBASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDZRN3Q9UPQ7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms