Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 KRT8P36-201ENST00000489121 1440 ntBASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBQLN1Q9UMX0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 POU5F1P3-201ENST00000428824 1078 ntBASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 FAM201B-201ENST00000458407 597 ntBASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 UNC93B5-201ENST00000530315 699 ntBASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
UBQLN1Q9UMX0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.93■■□□□ 1.1
UBQLN1Q9UMX0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 AC092368.3-202ENST00000574180 1591 ntBASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 PNMA6B-201ENST00000538162 1200 ntBASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.92■■□□□ 1.1
UBQLN1Q9UMX0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
UBQLN1Q9UMX0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 AC006128.1-201ENST00000624704 1661 ntBASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UBQLN1Q9UMX0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms