Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 INGX-201ENST00000359239 846 ntBASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 CR769767.2-201ENST00000622735 460 ntBASIC32.99■■■□□ 2.87
RIMBP3Q9UFD9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RIMBP3Q9UFD9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 AP005242.2-201ENST00000580065 1175 ntBASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC32.97■■■□□ 2.87
RIMBP3Q9UFD9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC32.96■■■□□ 2.87
RIMBP3Q9UFD9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RIMBP3Q9UFD9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC32.96■■■□□ 2.87
RIMBP3Q9UFD9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RIMBP3Q9UFD9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC32.96■■■□□ 2.87
RIMBP3Q9UFD9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
RIMBP3Q9UFD9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC32.95■■■□□ 2.87
RIMBP3Q9UFD9 KSR1P1-201ENST00000446298 240 ntBASIC32.95■■■□□ 2.87
RIMBP3Q9UFD9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC32.95■■■□□ 2.87
RIMBP3Q9UFD9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC32.95■■■□□ 2.87
RIMBP3Q9UFD9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
RIMBP3Q9UFD9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC32.95■■■□□ 2.86
RIMBP3Q9UFD9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.86
RIMBP3Q9UFD9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC32.95■■■□□ 2.86
RIMBP3Q9UFD9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC32.95■■■□□ 2.86
RIMBP3Q9UFD9 GRAMD4P8-201ENST00000605465 1115 ntBASIC32.95■■■□□ 2.86
RIMBP3Q9UFD9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 AC092647.4-201ENST00000457211 535 ntBASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 CR392000.1-201ENST00000624770 1228 ntBASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RIMBP3Q9UFD9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC32.93■■■□□ 2.86
RIMBP3Q9UFD9 RN7SL510P-201ENST00000581311 263 ntBASIC32.93■■■□□ 2.86
RIMBP3Q9UFD9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC32.93■■■□□ 2.86
RIMBP3Q9UFD9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RIMBP3Q9UFD9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
RIMBP3Q9UFD9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
RIMBP3Q9UFD9 KRT8P45-201ENST00000414328 1447 ntBASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 AL138966.2-201ENST00000621997 464 ntBASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RIMBP3Q9UFD9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC32.91■■■□□ 2.86
RIMBP3Q9UFD9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 AL022342.1-201ENST00000400363 863 ntBASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 MESTP1-201ENST00000404287 994 ntBASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC32.9■■■□□ 2.86
RIMBP3Q9UFD9 TSPY5P-201ENST00000426936 936 ntBASIC32.89■■■□□ 2.86
RIMBP3Q9UFD9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC32.89■■■□□ 2.86
RIMBP3Q9UFD9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
RIMBP3Q9UFD9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RIMBP3Q9UFD9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC32.88■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms