Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN1Q9P244 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN1Q9P244 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 AC011484.1-201ENST00000377652 1995 ntBASIC18.74■□□□□ 0.59
LRFN1Q9P244 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 AC128676.1-201ENST00000454392 318 ntBASIC18.74■□□□□ 0.59
LRFN1Q9P244 C2orf69P4-201ENST00000565394 541 ntBASIC18.74■□□□□ 0.59
LRFN1Q9P244 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRFN1Q9P244 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN1Q9P244 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 AL356652.1-201ENST00000615962 565 ntBASIC18.73■□□□□ 0.59
LRFN1Q9P244 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRFN1Q9P244 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN1Q9P244 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.72■□□□□ 0.59
LRFN1Q9P244 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN1Q9P244 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.71■□□□□ 0.59
LRFN1Q9P244 UNC93B4-201ENST00000505679 747 ntBASIC18.71■□□□□ 0.59
LRFN1Q9P244 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.71■□□□□ 0.59
LRFN1Q9P244 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.71■□□□□ 0.59
LRFN1Q9P244 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN1Q9P244 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms