Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TREX1Q9NSU2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TREX1Q9NSU2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 DUX4L16-201ENST00000555130 1264 ntBASIC20.41■□□□□ 0.86
TREX1Q9NSU2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 AC016405.3-201ENST00000607710 860 ntBASIC20.41■□□□□ 0.86
TREX1Q9NSU2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.41■□□□□ 0.86
TREX1Q9NSU2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 AC016769.1-201ENST00000409132 1010 ntBASIC20.4■□□□□ 0.86
TREX1Q9NSU2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TREX1Q9NSU2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TREX1Q9NSU2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TREX1Q9NSU2 AC099778.1-201ENST00000568593 1911 ntBASIC20.39■□□□□ 0.86
TREX1Q9NSU2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TREX1Q9NSU2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.39■□□□□ 0.86
TREX1Q9NSU2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TREX1Q9NSU2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.39■□□□□ 0.85
TREX1Q9NSU2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 AC011767.1-201ENST00000617410 1153 ntBASIC20.38■□□□□ 0.85
TREX1Q9NSU2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREX1Q9NSU2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 AC087633.2-202ENST00000565166 1439 ntBASIC20.37■□□□□ 0.85
TREX1Q9NSU2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TREX1Q9NSU2 CYP21A1P-202ENST00000354927 1481 ntBASIC20.37■□□□□ 0.85
TREX1Q9NSU2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 AC068338.2-201ENST00000563278 1430 ntBASIC20.36■□□□□ 0.85
TREX1Q9NSU2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms