Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 KRT17P2-201ENST00000300992 1314 ntBASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PDLIM7Q9NR12 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 KRT18P68-201ENST00000392293 1000 ntBASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 AC133561.5-201ENST00000635547 218 ntBASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.98■■□□□ 1.27
PDLIM7Q9NR12 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.97■■□□□ 1.27
PDLIM7Q9NR12 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDLIM7Q9NR12 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 AC087499.1-201ENST00000418141 1075 ntBASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 AL024507.2-201ENST00000606070 2574 ntBASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 AL049637.2-201ENST00000641778 930 ntBASIC22.95■■□□□ 1.26
PDLIM7Q9NR12 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDLIM7Q9NR12 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms