Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GCM1Q9NP62 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GCM1Q9NP62 AL512625.2-201ENST00000417533 625 ntBASIC17.41■□□□□ 0.38
GCM1Q9NP62 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GCM1Q9NP62 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.41■□□□□ 0.38
GCM1Q9NP62 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GCM1Q9NP62 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 ID1-201ENST00000376105 1233 ntBASIC17.4■□□□□ 0.38
GCM1Q9NP62 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 AC121338.2-201ENST00000622535 1744 ntBASIC17.4■□□□□ 0.38
GCM1Q9NP62 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.4■□□□□ 0.38
GCM1Q9NP62 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GCM1Q9NP62 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.39■□□□□ 0.38
GCM1Q9NP62 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GCM1Q9NP62 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.39■□□□□ 0.37
GCM1Q9NP62 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 AC093787.1-201ENST00000450396 207 ntBASIC17.39■□□□□ 0.37
GCM1Q9NP62 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.39■□□□□ 0.37
GCM1Q9NP62 AL109923.1-201ENST00000618799 583 ntBASIC17.39■□□□□ 0.37
GCM1Q9NP62 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GCM1Q9NP62 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GCM1Q9NP62 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GCM1Q9NP62 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GCM1Q9NP62 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 HLA-L-209ENST00000420110 1011 ntBASIC17.38■□□□□ 0.37
GCM1Q9NP62 TSPY6P-201ENST00000448518 926 ntBASIC17.38■□□□□ 0.37
GCM1Q9NP62 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.38■□□□□ 0.37
GCM1Q9NP62 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GCM1Q9NP62 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 MKRN4P-201ENST00000444706 1521 ntBASIC17.37■□□□□ 0.37
GCM1Q9NP62 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.37■□□□□ 0.37
GCM1Q9NP62 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GCM1Q9NP62 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.37■□□□□ 0.37
GCM1Q9NP62 AC104771.1-201ENST00000603335 964 ntBASIC17.37■□□□□ 0.37
GCM1Q9NP62 AC100791.3-201ENST00000617619 330 ntBASIC17.37■□□□□ 0.37
GCM1Q9NP62 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
GCM1Q9NP62 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 AC010980.2-201ENST00000587099 1412 ntBASIC17.37■□□□□ 0.37
GCM1Q9NP62 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
GCM1Q9NP62 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GCM1Q9NP62 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.37■□□□□ 0.37
GCM1Q9NP62 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCM1Q9NP62 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
GCM1Q9NP62 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms