Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN28AQ9H9Z2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 AC061975.6-201ENST00000579045 1553 ntBASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN28AQ9H9Z2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 MFSD11-216ENST00000590393 1141 ntBASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN28AQ9H9Z2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 CDCA4P2-201ENST00000441182 718 ntBASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 AC073111.5-205ENST00000641717 521 ntBASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.52■□□□□ 0.72
LIN28AQ9H9Z2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LIN28AQ9H9Z2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.52■□□□□ 0.71
LIN28AQ9H9Z2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
LIN28AQ9H9Z2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LIN28AQ9H9Z2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LIN28AQ9H9Z2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 KRT18P11-201ENST00000435214 1283 ntBASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LIN28AQ9H9Z2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms