Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 AC091799.1-201ENST00000422823 811 ntBASIC18.9■□□□□ 0.62
UBQLN3Q9H347 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 OR10C1-204ENST00000622521 1039 ntBASIC18.9■□□□□ 0.62
UBQLN3Q9H347 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN3Q9H347 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBQLN3Q9H347 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 AC142086.2-201ENST00000569753 217 ntBASIC18.89■□□□□ 0.61
UBQLN3Q9H347 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBQLN3Q9H347 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 GABARAPL3-202ENST00000624044 1851 ntBASIC18.88■□□□□ 0.61
UBQLN3Q9H347 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 AP005212.1-201ENST00000581547 1997 ntBASIC18.88■□□□□ 0.61
UBQLN3Q9H347 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 AL512625.2-201ENST00000417533 625 ntBASIC18.88■□□□□ 0.61
UBQLN3Q9H347 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 AC105036.2-201ENST00000569468 176 ntBASIC18.88■□□□□ 0.61
UBQLN3Q9H347 AC069236.1-201ENST00000604339 616 ntBASIC18.88■□□□□ 0.61
UBQLN3Q9H347 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.88■□□□□ 0.61
UBQLN3Q9H347 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 AC073314.1-201ENST00000568729 2216 ntBASIC18.87■□□□□ 0.61
UBQLN3Q9H347 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.87■□□□□ 0.61
UBQLN3Q9H347 AC121338.2-201ENST00000622535 1744 ntBASIC18.87■□□□□ 0.61
UBQLN3Q9H347 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 AL355802.2-201ENST00000402069 882 ntBASIC18.86■□□□□ 0.61
UBQLN3Q9H347 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 RARRES2P4-201ENST00000514074 484 ntBASIC18.86■□□□□ 0.61
UBQLN3Q9H347 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 AC016405.3-201ENST00000607710 860 ntBASIC18.86■□□□□ 0.61
UBQLN3Q9H347 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 AC008694.1-202ENST00000636953 945 ntBASIC18.86■□□□□ 0.61
UBQLN3Q9H347 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms