Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 AC005837.3-201ENST00000612163 286 ntBASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.83■□□□□ 0.61
POLR2J3Q9H1A7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR2J3Q9H1A7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
POLR2J3Q9H1A7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
POLR2J3Q9H1A7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 AC123595.1-201ENST00000440769 1046 ntBASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 AC105265.2-201ENST00000467189 838 ntBASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 KRT18P20-201ENST00000548986 1279 ntBASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2J3Q9H1A7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
POLR2J3Q9H1A7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 CCDC92B-201ENST00000575506 885 ntBASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 AC116050.2-201ENST00000612102 1779 ntBASIC18.81■□□□□ 0.6
POLR2J3Q9H1A7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 AC099778.1-201ENST00000568593 1911 ntBASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2J3Q9H1A7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2J3Q9H1A7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms