Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPBQ9H078 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLPBQ9H078 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.48■□□□□ 0.87
CLPBQ9H078 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPBQ9H078 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.48■□□□□ 0.87
CLPBQ9H078 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.48■□□□□ 0.87
CLPBQ9H078 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLPBQ9H078 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.48■□□□□ 0.87
CLPBQ9H078 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPBQ9H078 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPBQ9H078 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.47■□□□□ 0.87
CLPBQ9H078 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.47■□□□□ 0.87
CLPBQ9H078 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPBQ9H078 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CLPBQ9H078 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPBQ9H078 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPBQ9H078 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPBQ9H078 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPBQ9H078 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLPBQ9H078 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
CLPBQ9H078 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CLPBQ9H078 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.46■□□□□ 0.87
CLPBQ9H078 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPBQ9H078 AC091799.1-201ENST00000422823 811 ntBASIC20.46■□□□□ 0.87
CLPBQ9H078 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPBQ9H078 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPBQ9H078 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.46■□□□□ 0.87
CLPBQ9H078 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPBQ9H078 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPBQ9H078 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPBQ9H078 AC116050.2-201ENST00000612102 1779 ntBASIC20.45■□□□□ 0.86
CLPBQ9H078 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPBQ9H078 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPBQ9H078 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
CLPBQ9H078 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPBQ9H078 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLPBQ9H078 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 AL121603.2-201ENST00000557373 2117 ntBASIC20.44■□□□□ 0.86
CLPBQ9H078 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CLPBQ9H078 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
CLPBQ9H078 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.44■□□□□ 0.86
CLPBQ9H078 RNA5SP413-201ENST00000516373 109 ntBASIC20.44■□□□□ 0.86
CLPBQ9H078 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.44■□□□□ 0.86
CLPBQ9H078 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.44■□□□□ 0.86
CLPBQ9H078 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.44■□□□□ 0.86
CLPBQ9H078 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.44■□□□□ 0.86
CLPBQ9H078 AC083880.1-201ENST00000608266 535 ntBASIC20.44■□□□□ 0.86
CLPBQ9H078 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CLPBQ9H078 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.44■□□□□ 0.86
CLPBQ9H078 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.44■□□□□ 0.86
CLPBQ9H078 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPBQ9H078 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.44■□□□□ 0.86
CLPBQ9H078 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPBQ9H078 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPBQ9H078 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CLPBQ9H078 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPBQ9H078 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLPBQ9H078 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPBQ9H078 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms