Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 AC096631.2-201ENST00000436136 790 ntBASIC17.48■□□□□ 0.39
NICN1Q9BSH3 PBX2P1-201ENST00000493219 1291 ntBASIC17.48■□□□□ 0.39
NICN1Q9BSH3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NICN1Q9BSH3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 AC092720.2-201ENST00000602388 1665 ntBASIC17.47■□□□□ 0.39
NICN1Q9BSH3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NICN1Q9BSH3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 AC131212.1-201ENST00000613771 668 ntBASIC17.46■□□□□ 0.39
NICN1Q9BSH3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
NICN1Q9BSH3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NICN1Q9BSH3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 TCF3P1-201ENST00000423021 1937 ntBASIC17.45■□□□□ 0.38
NICN1Q9BSH3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.45■□□□□ 0.38
NICN1Q9BSH3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 RNF165-205ENST00000588679 2904 ntBASIC17.44■□□□□ 0.38
NICN1Q9BSH3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NICN1Q9BSH3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms