Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CMTM3Q96MX0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.55■□□□□ 0.4
CMTM3Q96MX0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CMTM3Q96MX0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CMTM3Q96MX0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 AC136469.2-201ENST00000623944 1028 ntBASIC17.54■□□□□ 0.4
CMTM3Q96MX0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CMTM3Q96MX0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 SLC47A1P1-202ENST00000449666 945 ntBASIC17.53■□□□□ 0.4
CMTM3Q96MX0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 AL356740.2-201ENST00000601559 647 ntBASIC17.53■□□□□ 0.4
CMTM3Q96MX0 MIR2861-201ENST00000636310 90 ntBASIC17.53■□□□□ 0.4
CMTM3Q96MX0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CMTM3Q96MX0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 Z82202.1-201ENST00000623446 1880 ntBASIC17.52■□□□□ 0.4
CMTM3Q96MX0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.52■□□□□ 0.4
CMTM3Q96MX0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 DUX4L19-201ENST00000557448 1267 ntBASIC17.52■□□□□ 0.4
CMTM3Q96MX0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.52■□□□□ 0.4
CMTM3Q96MX0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.52■□□□□ 0.39
CMTM3Q96MX0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMTM3Q96MX0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMTM3Q96MX0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMTM3Q96MX0 AC093484.2-201ENST00000580996 2166 ntBASIC17.52■□□□□ 0.39
CMTM3Q96MX0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMTM3Q96MX0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CMTM3Q96MX0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 AC011298.3-201ENST00000615796 283 ntBASIC17.51■□□□□ 0.39
CMTM3Q96MX0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CMTM3Q96MX0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms