Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 AC142381.2-201ENST00000566120 298 ntBASIC17.66■□□□□ 0.42
CPNE2Q96FN4 AC138907.5-202ENST00000569484 235 ntBASIC17.66■□□□□ 0.42
CPNE2Q96FN4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE2Q96FN4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 AL139246.5-201ENST00000606645 996 ntBASIC17.65■□□□□ 0.42
CPNE2Q96FN4 AL031432.3-201ENST00000607698 485 ntBASIC17.65■□□□□ 0.42
CPNE2Q96FN4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 AC027702.1-201ENST00000563810 1770 ntBASIC17.65■□□□□ 0.42
CPNE2Q96FN4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE2Q96FN4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE2Q96FN4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.64■□□□□ 0.42
CPNE2Q96FN4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE2Q96FN4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE2Q96FN4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 SUDS3P1-201ENST00000505831 966 ntBASIC17.63■□□□□ 0.41
CPNE2Q96FN4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE2Q96FN4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE2Q96FN4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms