Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NMD3Q96D46 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NMD3Q96D46 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NMD3Q96D46 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NMD3Q96D46 UNC93B3-201ENST00000308076 687 ntBASIC19.24■□□□□ 0.67
NMD3Q96D46 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.24■□□□□ 0.67
NMD3Q96D46 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.24■□□□□ 0.67
NMD3Q96D46 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NMD3Q96D46 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.24■□□□□ 0.67
NMD3Q96D46 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.24■□□□□ 0.67
NMD3Q96D46 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.24■□□□□ 0.67
NMD3Q96D46 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
NMD3Q96D46 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.24■□□□□ 0.67
NMD3Q96D46 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
NMD3Q96D46 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.24■□□□□ 0.67
NMD3Q96D46 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NMD3Q96D46 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 AC026471.6-201ENST00000622954 1905 ntBASIC19.23■□□□□ 0.67
NMD3Q96D46 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NMD3Q96D46 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.23■□□□□ 0.67
NMD3Q96D46 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NMD3Q96D46 LTB4R2-202ENST00000528054 3092 ntBASIC19.23■□□□□ 0.67
NMD3Q96D46 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.23■□□□□ 0.67
NMD3Q96D46 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NMD3Q96D46 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 AC027702.1-201ENST00000563810 1770 ntBASIC19.23■□□□□ 0.67
NMD3Q96D46 AC006128.1-201ENST00000624704 1661 ntBASIC19.23■□□□□ 0.67
NMD3Q96D46 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.23■□□□□ 0.67
NMD3Q96D46 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NMD3Q96D46 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NMD3Q96D46 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NMD3Q96D46 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NMD3Q96D46 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NMD3Q96D46 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NMD3Q96D46 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.22■□□□□ 0.67
NMD3Q96D46 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NMD3Q96D46 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NMD3Q96D46 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
NMD3Q96D46 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NMD3Q96D46 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NMD3Q96D46 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NMD3Q96D46 AC005332.8-201ENST00000622750 2735 ntBASIC19.22■□□□□ 0.67
NMD3Q96D46 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.21■□□□□ 0.67
NMD3Q96D46 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NMD3Q96D46 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.21■□□□□ 0.67
NMD3Q96D46 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NMD3Q96D46 AC010141.3-201ENST00000456659 717 ntBASIC19.21■□□□□ 0.67
NMD3Q96D46 AP005435.1-201ENST00000529293 1178 ntBASIC19.21■□□□□ 0.67
NMD3Q96D46 AC024257.2-201ENST00000549699 147 ntBASIC19.21■□□□□ 0.67
NMD3Q96D46 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 AC104564.3-201ENST00000582367 638 ntBASIC19.21■□□□□ 0.67
NMD3Q96D46 MIR4767-201ENST00000582827 78 ntBASIC19.21■□□□□ 0.67
NMD3Q96D46 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 FZD10-202ENST00000539839 3282 ntBASIC19.21■□□□□ 0.67
NMD3Q96D46 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NMD3Q96D46 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NMD3Q96D46 AC008406.3-201ENST00000620001 1374 ntBASIC19.2■□□□□ 0.66
NMD3Q96D46 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.2■□□□□ 0.66
NMD3Q96D46 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.2■□□□□ 0.66
NMD3Q96D46 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.2■□□□□ 0.66
NMD3Q96D46 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.2■□□□□ 0.66
NMD3Q96D46 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NMD3Q96D46 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.2■□□□□ 0.66
NMD3Q96D46 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.2■□□□□ 0.66
NMD3Q96D46 AL136162.1-201ENST00000607711 1078 ntBASIC19.2■□□□□ 0.66
NMD3Q96D46 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.2■□□□□ 0.66
NMD3Q96D46 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NMD3Q96D46 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NMD3Q96D46 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NMD3Q96D46 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
NMD3Q96D46 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.19■□□□□ 0.66
NMD3Q96D46 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.19■□□□□ 0.66
NMD3Q96D46 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NMD3Q96D46 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NMD3Q96D46 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NMD3Q96D46 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NMD3Q96D46 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms