Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 AC133552.2-202ENST00000575694 574 ntBASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 CYP21A1P-202ENST00000354927 1481 ntBASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC127Q96BQ5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 AL157384.1-201ENST00000445995 2473 ntBASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 AC105036.2-201ENST00000569468 176 ntBASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 MIR2861-201ENST00000636310 90 ntBASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CCDC127Q96BQ5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
CCDC127Q96BQ5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 AL355472.2-201ENST00000422958 438 ntBASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
CCDC127Q96BQ5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 AC083906.2-201ENST00000511578 360 ntBASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 AF201337.1-201ENST00000520239 748 ntBASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 AC010980.2-201ENST00000587099 1412 ntBASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC127Q96BQ5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CCDC127Q96BQ5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC127Q96BQ5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms