Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
RPGRQ92834 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 TSPY15P-201ENST00000457163 923 ntBASIC25.3■■□□□ 1.64
RPGRQ92834 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.3■■□□□ 1.64
RPGRQ92834 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRQ92834 AC133561.5-201ENST00000635547 218 ntBASIC25.3■■□□□ 1.64
RPGRQ92834 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRQ92834 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRQ92834 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRQ92834 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RPGRQ92834 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRQ92834 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.29■■□□□ 1.64
RPGRQ92834 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRQ92834 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRQ92834 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.29■■□□□ 1.64
RPGRQ92834 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRQ92834 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.29■■□□□ 1.64
RPGRQ92834 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.29■■□□□ 1.64
RPGRQ92834 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.29■■□□□ 1.64
RPGRQ92834 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRQ92834 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRQ92834 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.28■■□□□ 1.64
RPGRQ92834 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRQ92834 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRQ92834 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRQ92834 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.28■■□□□ 1.64
RPGRQ92834 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.28■■□□□ 1.64
RPGRQ92834 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.28■■□□□ 1.64
RPGRQ92834 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRQ92834 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRQ92834 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.27■■□□□ 1.64
RPGRQ92834 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
RPGRQ92834 AC087499.1-201ENST00000418141 1075 ntBASIC25.27■■□□□ 1.64
RPGRQ92834 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.27■■□□□ 1.64
RPGRQ92834 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.27■■□□□ 1.64
RPGRQ92834 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.27■■□□□ 1.64
RPGRQ92834 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.27■■□□□ 1.64
RPGRQ92834 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
RPGRQ92834 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RPGRQ92834 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.26■■□□□ 1.63
RPGRQ92834 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.26■■□□□ 1.63
RPGRQ92834 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.26■■□□□ 1.63
RPGRQ92834 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RPGRQ92834 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.25■■□□□ 1.63
RPGRQ92834 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.25■■□□□ 1.63
RPGRQ92834 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
RPGRQ92834 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.25■■□□□ 1.63
RPGRQ92834 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.25■■□□□ 1.63
RPGRQ92834 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.25■■□□□ 1.63
RPGRQ92834 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.25■■□□□ 1.63
RPGRQ92834 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.25■■□□□ 1.63
RPGRQ92834 AL355075.4-201ENST00000554988 638 ntBASIC25.25■■□□□ 1.63
RPGRQ92834 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
RPGRQ92834 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.25■■□□□ 1.63
RPGRQ92834 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RPGRQ92834 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RPGRQ92834 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.24■■□□□ 1.63
RPGRQ92834 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.24■■□□□ 1.63
RPGRQ92834 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms