Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF4Q92544 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 LINC01521-201ENST00000504184 1943 ntBASIC19.21■□□□□ 0.67
TM9SF4Q92544 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 PRORSD1P-201ENST00000295112 541 ntBASIC19.21■□□□□ 0.67
TM9SF4Q92544 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF4Q92544 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF4Q92544 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 FAM21FP-204ENST00000608637 956 ntBASIC19.2■□□□□ 0.66
TM9SF4Q92544 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TM9SF4Q92544 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF4Q92544 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 AC100791.3-201ENST00000617619 330 ntBASIC19.19■□□□□ 0.66
TM9SF4Q92544 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TM9SF4Q92544 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF4Q92544 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms