Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
GBF1Q92538 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.05■■□□□ 1.12
GBF1Q92538 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.05■■□□□ 1.12
GBF1Q92538 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GBF1Q92538 AC233723.2-201ENST00000623798 2106 ntBASIC22.05■■□□□ 1.12
GBF1Q92538 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
GBF1Q92538 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
GBF1Q92538 MMP23A-201ENST00000234610 1017 ntBASIC22.05■■□□□ 1.12
GBF1Q92538 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GBF1Q92538 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GBF1Q92538 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.05■■□□□ 1.12
GBF1Q92538 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.05■■□□□ 1.12
GBF1Q92538 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.05■■□□□ 1.12
GBF1Q92538 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
GBF1Q92538 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.04■■□□□ 1.12
GBF1Q92538 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
GBF1Q92538 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.04■■□□□ 1.12
GBF1Q92538 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.04■■□□□ 1.12
GBF1Q92538 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.04■■□□□ 1.12
GBF1Q92538 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.04■■□□□ 1.12
GBF1Q92538 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
GBF1Q92538 AC079598.2-202ENST00000546624 1451 ntBASIC22.04■■□□□ 1.12
GBF1Q92538 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GBF1Q92538 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
GBF1Q92538 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GBF1Q92538 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GBF1Q92538 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
GBF1Q92538 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.03■■□□□ 1.12
GBF1Q92538 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.03■■□□□ 1.12
GBF1Q92538 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.03■■□□□ 1.12
GBF1Q92538 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.03■■□□□ 1.12
GBF1Q92538 AL031963.3-201ENST00000606441 850 ntBASIC22.03■■□□□ 1.12
GBF1Q92538 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GBF1Q92538 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.03■■□□□ 1.12
GBF1Q92538 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
GBF1Q92538 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
GBF1Q92538 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.03■■□□□ 1.12
GBF1Q92538 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.03■■□□□ 1.12
GBF1Q92538 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
GBF1Q92538 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.03■■□□□ 1.12
GBF1Q92538 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GBF1Q92538 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
GBF1Q92538 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 C1orf229-201ENST00000623686 2258 ntBASIC22.02■■□□□ 1.12
GBF1Q92538 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
GBF1Q92538 AL353807.1-201ENST00000427475 662 ntBASIC22.02■■□□□ 1.12
GBF1Q92538 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.02■■□□□ 1.12
GBF1Q92538 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GBF1Q92538 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.02■■□□□ 1.12
GBF1Q92538 AF186192.3-201ENST00000583427 947 ntBASIC22.02■■□□□ 1.12
GBF1Q92538 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.02■■□□□ 1.12
GBF1Q92538 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.01■■□□□ 1.11
GBF1Q92538 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
GBF1Q92538 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.01■■□□□ 1.11
GBF1Q92538 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 UNC93B2-201ENST00000285383 730 ntBASIC22.01■■□□□ 1.11
GBF1Q92538 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.01■■□□□ 1.11
GBF1Q92538 RBM17P1-201ENST00000453646 1190 ntBASIC22.01■■□□□ 1.11
GBF1Q92538 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.01■■□□□ 1.11
GBF1Q92538 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.01■■□□□ 1.11
GBF1Q92538 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.01■■□□□ 1.11
GBF1Q92538 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
GBF1Q92538 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.01■■□□□ 1.11
GBF1Q92538 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
GBF1Q92538 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.01■■□□□ 1.11
GBF1Q92538 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GBF1Q92538 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
GBF1Q92538 KRT16P5-201ENST00000455284 522 ntBASIC22■■□□□ 1.11
GBF1Q92538 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22■■□□□ 1.11
GBF1Q92538 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22■■□□□ 1.11
GBF1Q92538 AC127496.7-201ENST00000625110 1798 ntBASIC22■■□□□ 1.11
GBF1Q92538 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22■■□□□ 1.11
GBF1Q92538 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GBF1Q92538 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22■■□□□ 1.11
GBF1Q92538 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
GBF1Q92538 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22■■□□□ 1.11
GBF1Q92538 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
GBF1Q92538 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms