Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 AL355802.2-201ENST00000402069 882 ntBASIC20.82■□□□□ 0.92
SCG3Q8WXD2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 AC005181.1-201ENST00000604782 1256 ntBASIC20.82■□□□□ 0.92
SCG3Q8WXD2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 AC008175.2-201ENST00000612840 297 ntBASIC20.81■□□□□ 0.92
SCG3Q8WXD2 AC120498.10-201ENST00000621827 505 ntBASIC20.81■□□□□ 0.92
SCG3Q8WXD2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.81■□□□□ 0.92
SCG3Q8WXD2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCG3Q8WXD2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 LINC01006-201ENST00000333319 2292 ntBASIC20.79■□□□□ 0.92
SCG3Q8WXD2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 AC083906.2-201ENST00000511578 360 ntBASIC20.79■□□□□ 0.92
SCG3Q8WXD2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.79■□□□□ 0.92
SCG3Q8WXD2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 AC010536.3-201ENST00000620306 533 ntBASIC20.79■□□□□ 0.92
SCG3Q8WXD2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCG3Q8WXD2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCG3Q8WXD2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 SLC29A4P1-201ENST00000398760 971 ntBASIC20.77■□□□□ 0.92
SCG3Q8WXD2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms